Global functions | |
---|---|
%>% | Man page |
[,cohorts,character,missing,missing-method | Man page |
[,cohorts,missing,missing,missing-method | Man page |
[,cohorts,numeric,missing,missing-method | Man page |
[,performance_metrics,character,missing,missing-method | Man page |
[,performance_metrics,missing,missing,missing-method | Man page |
[,performance_metrics,numeric,missing,missing-method | Man page |
[,publications,character,missing,missing-method | Man page |
[,publications,missing,missing,missing-method | Man page |
[,publications,numeric,missing,missing-method | Man page |
[,releases,Date,missing,missing-method | Man page |
[,releases,character,missing,missing-method | Man page |
[,releases,missing,missing,missing-method | Man page |
[,releases,numeric,missing,missing-method | Man page |
[,sample_sets,character,missing,missing-method | Man page |
[,sample_sets,missing,missing,missing-method | Man page |
[,sample_sets,numeric,missing,missing-method | Man page |
[,scores,character,missing,missing-method | Man page |
[,scores,missing,missing,missing-method | Man page |
[,scores,numeric,missing,missing-method | Man page |
[,trait_categories,character,missing,missing-method | Man page |
[,trait_categories,missing,missing,missing-method | Man page |
[,trait_categories,numeric,missing,missing-method | Man page |
[,traits,character,missing,missing-method | Man page |
[,traits,missing,missing,missing-method | Man page |
[,traits,numeric,missing,missing-method | Man page |
ancestry_categories | Man page |
as_tidy_tables_ancestry_categories | Source code |
as_tidy_tables_cohorts | Source code |
as_tidy_tables_performance_metrics | Source code |
as_tidy_tables_publications | Source code |
as_tidy_tables_releases | Source code |
as_tidy_tables_sample_sets | Source code |
as_tidy_tables_scores | Source code |
as_tidy_tables_trait_categories | Source code |
as_tidy_tables_traits | Source code |
bind | Man page |
clear_cache | Man page Source code |
coerce_to_s4_cohorts | Source code |
coerce_to_s4_performance_metrics | Source code |
coerce_to_s4_publications | Source code |
coerce_to_s4_releases | Source code |
coerce_to_s4_sample_sets | Source code |
coerce_to_s4_scores | Source code |
coerce_to_s4_trait_categories | Source code |
coerce_to_s4_traits | Source code |
cohorts | Man page Source code |
cohorts-class | Man page |
collect_ancestries | Source code |
collect_pgs_ids | Man page Source code |
collect_samples | Man page Source code |
contains_question_mark | Man page Source code |
count | Man page Source code |
drop_metadata_cols | Source code |
endofunction2 | Source code |
extract_from_comment | Source code |
filter_by_id | Man page |
first_non_na | Man page Source code |
get | Source code |
get_ancestry_categories | Man page Source code |
get_ancestry_categories_all | Source code |
get_ancestry_category | Source code |
get_ancestry_symbol_mappings | Man page Source code |
get_cohort | Source code |
get_cohort_all | Source code |
get_cohort_by_cohort_symbol | Source code |
get_cohorts | Man page Source code |
get_gwas_get_score_ids | Source code |
get_gwas_get_score_ids_by_gcst_id | Source code |
get_performance | Source code |
get_performance_all | Source code |
get_performance_by_pgs_id | Source code |
get_performance_by_ppm_id | Source code |
get_performance_metrics | Man page Source code |
get_publication | Source code |
get_publication_all | Source code |
get_publication_by_author | Source code |
get_publication_by_pgp_id | Source code |
get_publication_by_pgs_id | Source code |
get_publication_by_pubmed_id | Source code |
get_publications | Man page Source code |
get_release | Source code |
get_release_all | Source code |
get_release_by_release_date | Source code |
get_release_current | Source code |
get_releases | Man page Source code |
get_sample_set | Source code |
get_sample_sets | Man page Source code |
get_sample_sets_all | Source code |
get_sample_sets_by_pgs_id | Source code |
get_sample_sets_by_pss_id | Source code |
get_score | Source code |
get_score_all | Source code |
get_score_by_pgs_id | Source code |
get_score_by_pubmed_id | Source code |
get_score_by_trait_id | Source code |
get_scores | Man page Source code |
get_trait | Source code |
get_trait_all | Source code |
get_trait_by_efo_id | Source code |
get_trait_by_trait_term | Source code |
get_trait_categories | Man page Source code |
get_trait_category | Source code |
get_trait_category_all | Source code |
get_traits | Man page Source code |
intersect | Man page |
is_json_empty | Source code |
is_paginated | Man page Source code |
is_pgs_id | Man page Source code |
is_pubmed_id | Man page Source code |
list_to_s4 | Man page Source code |
make_paginated | Source code |
msg_400 | Man page Source code |
msg_404 | Man page Source code |
msg_empty | Man page Source code |
n | Man page |
n,cohorts-method | Man page |
n,performance_metrics-method | Man page |
n,publications-method | Man page |
n,releases-method | Man page |
n,sample_sets-method | Man page |
n,scores-method | Man page |
n,trait_categories-method | Man page |
n,traits-method | Man page |
n_pages | Man page Source code |
no_msg | Man page Source code |
nr_to_na | Man page Source code |
offsets | Man page Source code |
open_in_dbsnp | Man page Source code |
open_in_pgs_catalog | Man page Source code |
open_in_pubmed | Man page Source code |
p_endofunction | Source code |
performance_metrics | Man page Source code |
performance_metrics-class | Man page |
pgp_to_pgs | Man page Source code |
pgp_to_ppm | Man page Source code |
pgp_to_pss | Man page Source code |
pgs_ids_tbl | Source code |
pgs_server | Man page Source code |
pgs_to_pgp | Man page Source code |
pgs_to_ppm | Man page Source code |
pgs_to_pss | Man page Source code |
pgs_to_study | Man page Source code |
ppm_to_pgp | Man page Source code |
ppm_to_pgs | Man page Source code |
ppm_to_pss | Man page Source code |
predicate2 | Source code |
pss_to_pgp | Man page Source code |
pss_to_pgs | Man page Source code |
pss_to_ppm | Man page Source code |
publications | Man page Source code |
publications-class | Man page |
publications_tbl | Source code |
read_comment_block | Source code |
read_file_column_names | Source code |
read_one_pgs_scoring_file | Source code |
read_one_pgs_scoring_file_safe | Source code |
read_pgs_scoring_file_data | Source code |
read_pgs_scoring_file_metadata | Source code |
read_scoring_file | Man page Source code |
releases | Man page Source code |
releases-class | Man page |
relocate_metadata_cols | Source code |
remap_id | Man page Source code |
request | Man page Source code |
request_all | Man page Source code |
request_msg | Source code |
request_warning | Man page Source code |
s4_to_list | Man page Source code |
s4cohorts_cohorts_tbl | Source code |
s4cohorts_pgs_ids_tbl | Source code |
s4ppm_demographics_tbl | Source code |
s4ppm_performance_metrics_tbl | Source code |
s4ppm_pgs_classification_metrics_tbl | Source code |
s4ppm_pgs_cohorts_tbl | Source code |
s4ppm_pgs_effect_sizes_tbl | Source code |
s4ppm_pgs_other_metrics_tbl | Source code |
s4ppm_publications_tbl | Source code |
s4ppm_sample_sets_tbl | Source code |
s4ppm_samples_tbl | Source code |
s4pss_demographics_tbl | Source code |
s4pss_pgs_cohorts_tbl | Source code |
s4pss_sample_sets_tbl | Source code |
s4pss_samples_tbl | Source code |
s4releases_pgp_ids_tbl | Source code |
s4releases_pgs_ids_tbl | Source code |
s4releases_ppm_ids_tbl | Source code |
s4releases_releases_tbl | Source code |
s4scores_ancestry_frequencies_tbl | Source code |
s4scores_cohorts_tbl | Source code |
s4scores_demographics_tbl | Source code |
s4scores_multi_ancestry_composition_tbl | Source code |
s4scores_publications_tbl | Source code |
s4scores_samples_tbl | Source code |
s4scores_scores_tbl | Source code |
s4scores_stages_tally_tbl | Source code |
s4scores_traits_tbl | Source code |
s4trait_categories_trait_categories_tbl | Source code |
s4trait_categories_traits_tbl | Source code |
s4traits_child_pgs_ids_tbl | Source code |
s4traits_pgs_ids_tbl | Source code |
s4traits_trait_categories_tbl | Source code |
s4traits_trait_mapped_terms_tbl | Source code |
s4traits_trait_synonyms_tbl | Source code |
s4traits_traits_tbl | Source code |
sample_sets | Man page Source code |
sample_sets-class | Man page |
scores | Man page Source code |
scores-class | Man page |
setdiff | Man page |
setequal | Man page |
setop | Man page |
stages | Man page |
study_to_pgs | Man page Source code |
subset-cohorts | Man page |
subset-performance_metrics | Man page |
subset-publications | Man page |
subset-releases | Man page |
subset-sample_sets | Man page |
subset-scores | Man page |
subset-trait_categories | Man page |
subset-traits | Man page |
sure | Man page Source code |
trait_categories | Man page Source code |
trait_categories-class | Man page |
traits | Man page Source code |
traits-class | Man page |
union | Man page |
unpack_performance_metric | Source code |
unwrap_ancestry_count | Source code |
unwrap_ancestry_frequencies | Source code |
unwrap_cohort | Source code |
unwrap_cohort_extended | Source code |
unwrap_demographic | Source code |
unwrap_demographics | Source code |
unwrap_efotrait | Source code |
unwrap_interval | Source code |
unwrap_metric | Source code |
unwrap_multi_ancestry_composition | Source code |
unwrap_performance_metric | Source code |
unwrap_publication | Source code |
unwrap_publication_extended | Source code |
unwrap_publication_pgs_ids | Source code |
unwrap_release | Source code |
unwrap_release_pgp_ids | Source code |
unwrap_release_pgs_ids | Source code |
unwrap_release_ppm_ids | Source code |
unwrap_sample | Source code |
unwrap_sample_set | Source code |
unwrap_score | Source code |
unwrap_scores_cohorts | Source code |
unwrap_scores_demographics | Source code |
unwrap_scores_samples | Source code |
unwrap_traits | Source code |
unwrap_traits2 | Source code |
user_agent_id | Man page Source code |
write_xlsx | Man page Source code |
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