highest_components: Which component has the highest loading for a given gene

In marchinilab/SDAtools: SDAtools: A toolkit for SDA

Description

which_component plot component loadings for a given gene

Usage

highest_components(results, variable_name, top_n = 5, omic = 1)

Arguments

results	list; object containing result (output of read_output)
variable_name	character string; name or index of variable e.g. gene
top_n	integer; the number of components to label
omic	integer or character; index of the omic type to calculate contributions for, or name of omic type if you assigned a name

Value

A ggplot2 object

Examples

data(results)
highest_components(results, "Xrn1")

marchinilab/SDAtools documentation built on Jan. 31, 2020, 3:51 a.m.