get_batch_matrix: Get the batch matrix for fitting batch effect correction.
In markgene/yamatClassifier: Yet Another Methylation Array Toolkit: Classifier
View source: R/batch-effect-correction.R
get_batch_matrix R Documentation
Get the batch matrix for fitting batch effect correction.
Description
Get the batch matrix for fitting batch effect correction.
Usage
get_batch_matrix(batch = NULL, batch2 = NULL, covariates = NULL)
Arguments
batch
factor or vector indicating batches.
batch2
factor or vector indicating a second series of batches.
covariates
matrix or vector of numeric covariates to be adjusted for.
Details
Inspired by removeBatchEffect.
Value
a matrix for batch.
markgene/yamatClassifier documentation built on Oct. 14, 2024, 2:36 a.m.
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View source: R/batch-effect-correction.R
| get_batch_matrix | R Documentation |
Get the batch matrix for fitting batch effect correction.
Description
Get the batch matrix for fitting batch effect correction.
Usage
get_batch_matrix(batch = NULL, batch2 = NULL, covariates = NULL)
Arguments
batch |
factor or vector indicating batches. |
batch2 |
factor or vector indicating a second series of batches. |
covariates |
matrix or vector of numeric covariates to be adjusted for. |
Details
Inspired by removeBatchEffect.
Value
a matrix for batch.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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