README.md

In markheron/nucular: utility functions used for the analysis of genomic nucleosome data

nucular -- utility functions used for the analysis of genomic nucleosome data

The nucular package provides convienience functions for handling genomic data as lists of ff vectors (or vectors). The focus lies on comparing the genomic data by computing correlations and other comparison scores between the vector lists.

Installation

devtools::install_bitbucket(repo="markheron/nucular", auth_user="user_name", password="your_password", keep_source=TRUE)

Usage

library(nucular)

a <- list("chr1"=ff::ff(1:10), "chr2"=ff::ff(1:10))
b <- list("chr1"=ff::ff(1:10), "chr2"=ff::ff(10:1))

cor_ff_list(a, b)
#> [1] 0

License

The nucular package is licensed under the GPLv3 (http://www.gnu.org/licenses/gpl.html).

markheron/nucular documentation built on Feb. 18, 2020, 12:32 a.m.