cor_nucs_using_single_vecs: cor_nucs_using_single_vecs
In markheron/nucular: utility functions used for the analysis of genomic nucleosome data
Description
Usage
Arguments
Value
Description
Calculates the pearson correlation between two nucleosome occupancy profiles given their sparse representation.
Same as cor_nucs but uses an older non-optimized method, being kept for testing purposis.
Usage
1
cor_nucs_using_single_vecs(data_list1, data_list2, lengths)
Arguments
data_list1
first ff_list of nucleosome positions
data_list2
second ff_list of nucleosome positions
lengths
list of chromosome lengths (names must match subset of the data_list's names)
Value
correlation pearson correlation between the nucleosome occupancies
markheron/nucular documentation built on Feb. 18, 2020, 12:32 a.m.
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Description Usage Arguments Value
Description
Calculates the pearson correlation between two nucleosome occupancy profiles given their sparse representation. Same as cor_nucs but uses an older non-optimized method, being kept for testing purposis.
Usage
1 | cor_nucs_using_single_vecs(data_list1, data_list2, lengths)
|
Arguments
data_list1 |
first ff_list of nucleosome positions |
data_list2 |
second ff_list of nucleosome positions |
lengths |
list of chromosome lengths ( |
Value
correlation pearson correlation between the nucleosome occupancies
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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