adjust_X_chr: adjust_X_chr
In markheron/nucular: utility functions used for the analysis of genomic nucleosome data
Description
Usage
Arguments
Value
Description
Adjusts lower X chromosome counts due to cells being male or a mixture of male/female.
Usage
1
adjust_X_chr(ff_list, X_chr, Xfactor)
Arguments
ff_list
list of ff objects each representing data of one chromosome. IMPORTANT: the data in this list will be changed!
X_chr
(character) name of the X chromosome in ff_list
Xfactor
(numeric) factor by which the counts should be adjusted (2 for male cell lines, 4/3 for male/female mixtures, i.e. embryo's or unspecific adult flies)
Value
reference to the ff_list, which is now adjusted. IMPORTANT: this is the same ff_list as the input, no copy is created!
markheron/nucular documentation built on Feb. 18, 2020, 12:32 a.m.
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Description Usage Arguments Value
Description
Adjusts lower X chromosome counts due to cells being male or a mixture of male/female.
Usage
1 | adjust_X_chr(ff_list, X_chr, Xfactor)
|
Arguments
ff_list |
list of ff objects each representing data of one chromosome. IMPORTANT: the data in this list will be changed! |
X_chr |
(character) name of the X chromosome in |
Xfactor |
(numeric) factor by which the counts should be adjusted (2 for male cell lines, 4/3 for male/female mixtures, i.e. embryo's or unspecific adult flies) |
Value
reference to the ff_list, which is now adjusted. IMPORTANT: this is the same ff_list as the input, no copy is created!
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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