design_brain: Design corresponding to the CAGE10000 data

In markvdwiel/ShrinkBayes: Bayesian analysis of high-dimensional omics data, either Gaussian or counts

Design corresponding to the CAGE10000 data

Description

Contains the design of the CAGEdata10000 data

Usage

data(design_brain)

Format

A data frame with 25 observations on the following 3 variables.

pers

a numeric vector

batch

a factor with levels 0 1

groupfac

a factor with levels 1 2 3 4 5

Details

For details on the design, please see the references below.

Source

Pardo et al. (2012).

References

Van de Wiel MA, Leday GGR, Pardo L, Rue H, Van der Vaart AW, Van Wieringen WN (2012). Bayesian analysis of RNA sequencing data by estimating multiple shrinkage priors. Biostatistics.

Examples

data(CAGEdata10000)
data(design_brain)
## maybe str(design_brain) ; plot(design_brain) ...

markvdwiel/ShrinkBayes documentation built on March 27, 2022, 7:47 p.m.