designmirseq: Design corresponding to the mirseqnorm data

In markvdwiel/ShrinkBayes: Bayesian analysis of high-dimensional omics data, either Gaussian or counts

Design corresponding to the mirseqnorm data

Description

Contains the design of the mirseqnorm data

Usage

data(designmirseq)

Format

A data frame with 55 observations on the following 8 variables.

PM

a factor with levels P M

indiv

a factor with 27 levels

timepos

Binary

chemo

Binary

organ1

Binary

organ2

Binary

organ3

Binary

organ

Factor variable

Details

For details on the design, please see the references below. Note that organ contains the same info as organ1,organ2,organ3, but then as factor variable

Source

van de Wiel et al. (2013). Submitted.

References

Van de Wiel MA, Neerincx M, Buffart TE, Verheul HMW (2013). ShrinkBayes: a versatile R-package for analysis of count-based sequencing data in complex study designs. Submitted.

Examples

data(designmirseq)
## maybe str(CAGEdata10000) ; plot(CAGEdata10000) ...

markvdwiel/ShrinkBayes documentation built on March 27, 2022, 7:47 p.m.