encodeGenomes: Encode an ensemble of genomes into a numerical form
In mathornton01/Genomic-DFT-Yin-R: Fourier Analysis for Genomic Signals
Description
Usage
Arguments
Value
Examples
View source: R/Yin-DFT-Distances-R.r
Description
Will produce a list of either the 4D or the 2D representation of a set of
signals and return them in a list.
Usage
1
encodeGenomes(stringGenomes, dimension = "2D")
Arguments
stringGenomes
is a list containing the genomes in a string format
dimension
is a character string either '2D' or '4D'.
Value
A list containing matrixes of various column length, but either 2 or
4 rows.
Examples
1
2
3
4
encodeGenomes(list('ACCCCAATTAGAGGGACTTTGGGAACCGGAGAT','GGCCCAGAGGGAAACCGGT'),
'2D');
encodeGenomes(list('ACCCCAATTAGAGGGACTTTGGGAACCGGAGAT','GGCCCAGAGGGAAACCGGT'),
'4D');
mathornton01/Genomic-DFT-Yin-R documentation built on Dec. 21, 2021, 2:52 p.m.
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Description Usage Arguments Value Examples
View source: R/Yin-DFT-Distances-R.r
Description
Will produce a list of either the 4D or the 2D representation of a set of signals and return them in a list.
Usage
1 | encodeGenomes(stringGenomes, dimension = "2D")
|
Arguments
stringGenomes |
is a list containing the genomes in a string format |
dimension |
is a character string either '2D' or '4D'. |
Value
A list containing matrixes of various column length, but either 2 or 4 rows.
Examples
1 2 3 4 | encodeGenomes(list('ACCCCAATTAGAGGGACTTTGGGAACCGGAGAT','GGCCCAGAGGGAAACCGGT'),
'2D');
encodeGenomes(list('ACCCCAATTAGAGGGACTTTGGGAACCGGAGAT','GGCCCAGAGGGAAACCGGT'),
'4D');
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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