Description Usage Arguments Value Examples
Perform consensus clustering diagnostics to determine optimal K for pathway
clustDiag is function to perform consensus clustering diagnostics for
pathway clustering. It will generate consensus CDF and delta area plot and saved to
the folder named "clustDiag". These plots will help you determine the optimal number
of clusters K for pathway clustering. Run this first before
"clustPathway" output is chosen.
a list of two data frames: pathway specific ARS values and their permuted p-value (pathway on rows, column being ARS value or the p-values).
stored output in the folder named "clustDiag".
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## Not run: #ARS_pathway from the multiARS step results <- clustDiag(ARS_pathway) ## End(Not run)
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