indDE: Differential expression analysis for individual data.

Description Usage Arguments Value Examples

View source: R/indDE.R

Description

Differential expression analysis for individual data The indDE is function to perform differential expression analysis for individual data

Usage

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indDE(data, group, data.type, case.label, ctrl.label)

Arguments

data:

the raw expression data.

group:

the group label.

data.type:

either "microarray" or "RNAseq"

case.label:

label for the case group.

control.label:

label for the control group.

Value

summary consisting of log fold change, lfc standard error, p-value, q-value.

Examples

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## Not run: 
data(hb)
summaryDE <- indDE(data=data,group=group,data.type="microarray",
                  case.label="2", ctrl.label="1")

## End(Not run)

matianzhou/CAMO documentation built on May 21, 2019, 10:12 a.m.