mergeRaw: Merge multiple raw datasets preparing for cross-species...
In matianzhou/CAMO: Perform congruent analysis among model organisms

Description Usage Arguments Value Examples

Merge multiple raw datasets The mergeRaw is function to merge multiple raw datasets by matching orthologs

1 2	mergeRaw(data.list, species, ortholog.db, ortholog.file = NULL, reference = 1, unique = T)

`data.list:`	a list of data matrices.
`species:`	a vector specie names of same length as data.list.
`ortholog.db:`	the ortholog object (in R environment)
`ortholog.file:`	the ortholog file to be imported
`reference:`	the index of the reference data, the outputted merged list will be named using the rownames of this data.
`unique:`	logical value indicating whether to take only the "one to one" unique match (T) or allow "multiple to one" and "one to multiple" match (F)

an merged list of rdatasets (with same number of rows and rownames)

## Not run: 
data(hb)
hb.data <- data
hb.group <- group
data(hs)
hs.data <- data
hs.group <- group
data(ht)
ht.data <- data
ht.group <- group
data(mb)
mb.data <- data
mb.group <- group
data(ms)
ms.data <- data
ms.group <- group
data(mt)
mt.data <- data
mt.group <- group
data.list <- list(hb.data,hs.data,ht.data,mb.data,ms.data,mt.data)
species <- c(rep("human",3), rep("mouse",3))
data(hm_orth)
data.merge.list <- mergeRaw(data.list,species=species,
ortholog.db = hm_orth, reference=1,unique=T)

## End(Not run)