Man pages for matteodelucchi/TRAL-Result-Analysis
Analysis of the output of TRAL
| AAfreq_in_fasta | AA frequency from a fasta file |
| AAfreq_in_prot | Calculate the Amino Acid Frequency in a given AA-Sequence |
| AAfreq_in_TR | Calculate the Amino Acid Frequency in a given TR-MSA |
| AAratio_vs_Disorderpropensity | Amino Acid Ratio Plotted Against Disorderpropensity |
| beautifier | ggplot Beautifier Function |
| download_prot_sequence | Download Protein Sequence |
| getTRbyGene | Filter for Tandem Repeats by Gene Name |
| load_kinome | Load Human Proteome Kinome |
| load_swissprot | Load SwissProt Meta Data |
| load_tr_annotations | Load Tandem Repeat Annotation Data |
| paper.figure | ggplot function to prepare figures for publication |
| plot_AAratio | Plot AA ratio |
| plot_AAratio_comparison | Compare the AA frequency in two groups. |
| protein_id_by_number_of_TR | Get the Protein ID from the Number of TR |
| TRdist_in_proteome | Tandem Repeat Distribution in Proteome |
| TR_location | Display TR center location |
