AAfreq_in_TR: Calculate the Amino Acid Frequency in a given TR-MSA
In matteodelucchi/TRAL-Result-Analysis: Analysis of the output of TRAL
Description
Usage
Arguments
Value
Description
Calculate the Amino Acid Frequency in a given TR-MSA
Usage
1
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3
4
5
AAfreq_in_TR(
tr_all_sp,
includeSpaces = FALSE,
aa_ignore = c("U", "O", "B", "J", "Z", "X", "*", "-", ".", "+", "other")
)
Arguments
tr_all_sp
a data.frame with TR results imported through load_tr_annotations. Requires to have the MSA included as column.
Value
A data.frame with AA, it's absolute frequency and it's ratios.
matteodelucchi/TRAL-Result-Analysis documentation built on Dec. 2, 2019, 11:42 p.m.
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Description Usage Arguments Value
Description
Calculate the Amino Acid Frequency in a given TR-MSA
Usage
1 2 3 4 5 | AAfreq_in_TR(
tr_all_sp,
includeSpaces = FALSE,
aa_ignore = c("U", "O", "B", "J", "Z", "X", "*", "-", ".", "+", "other")
)
|
Arguments
tr_all_sp |
a data.frame with TR results imported through |
Value
A data.frame with AA, it's absolute frequency and it's ratios.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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