CellCycleScoring: Score cell cycle phases
In mayer-lab/SeuratForMayer2018: Seurat : R Toolkit for Single Cell Genomics
Description
Usage
Arguments
Value
See Also
Description
Score cell cycle phases
Usage
1
CellCycleScoring(object, g2m.genes, s.genes, set.ident = FALSE)
Arguments
object
A Seurat object
g2m.genes
A vector of genes associated with G2M phase
s.genes
A vector of genes associated with S phases
set.ident
If true, sets identity to phase assignments
Stashes old identities in 'old.ident'
Value
A Seurat object with the following columns added to object@meta.data: S.Score, G2M.Score, and Phase
See Also
mayer-lab/SeuratForMayer2018 documentation built on May 25, 2019, 9:34 p.m.
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Description Usage Arguments Value See Also
Description
Score cell cycle phases
Usage
1 | CellCycleScoring(object, g2m.genes, s.genes, set.ident = FALSE)
|
Arguments
object |
A Seurat object |
g2m.genes |
A vector of genes associated with G2M phase |
s.genes |
A vector of genes associated with S phases |
set.ident |
If true, sets identity to phase assignments Stashes old identities in 'old.ident' |
Value
A Seurat object with the following columns added to object@meta.data: S.Score, G2M.Score, and Phase
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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