uniprot.to.entrez: Uniprot Accession to Entrez Gene ID conversion

In mehrankr/AbHAC: Aberration Hub Analysis of Cancer

Description

Converts Uniprot accession to Entrez Gene ID

Usage

uniprot.to.entrez(uniprot = NULL, id.con.set = id.conversion.set)

Arguments

uniprot	is a vector of uniprot accession IDs
id.con.set	A dataframe for ID conversions provided as global variable id.conversion.set. Columns represent Entrez gene ID, Uniprot Accession, Gene Symbol, Ensembl gene ID and refseq protein ID (all human)

Value

If a Entrez accession is not found, it returns the ID itself instead of "".

Author(s)

Mehran Karimzadeh mehran.karimzadehreghbati at mail dot mcgill dot ca

Examples

uniprot.to.entrez(ids.to.uniprot("VHL"))

mehrankr/AbHAC documentation built on May 22, 2019, 6:49 p.m.