uniprot.to.hgnc: Uniprot Accession to HGNC symbol Conversion

In mehrankr/AbHAC: Aberration Hub Analysis of Cancer

Description

This function is used internally to convert uniprot Accession to HGNC symbol

Usage

uniprot.to.hgnc(uniprot, id.con.set = id.conversion.set)

Arguments

uniprot	is a vector of Uniprot accession IDs
id.con.set	A dataframe for ID conversions provided as global variable id.conversion.set. Columns represent Entrez gene ID, Uniprot Accession, Gene Symbol, Ensembl gene ID and refseq protein ID (all human)

Value

If a HGNC is not found, it returns the ID itself instead of NA

Author(s)

Mehran Karimzadeh mehran.karimzadehreghbati at mail dot mcgill dot ca

Examples

uniprot.to.hgnc(ids.to.uniprot("VHL"))

mehrankr/AbHAC documentation built on May 22, 2019, 6:49 p.m.