getVariantAnnotation: getVariantAnnotation
In melsiddieg/cellbaseR: Querying annotation data from the high performance Cellbase web
getVariantAnnotation R Documentation
getVariantAnnotation
Description
A convienice method to fetch variant annotation for specific variant/s
Usage
getVariantAnnotation(object, id, param = NULL)
Arguments
object
an object of class CellBaseR
id
a charcter vector of length < 200 of genomic variants,
eg 19:45411941:T:C
param
an object of class CellBaseParam
Value
a dataframe of the query result
Examples
cb <- CellBaseR()
res <- getVariantAnnotation(cb, "19:45411941:T:C")
melsiddieg/cellbaseR documentation built on Jan. 16, 2024, 4:12 a.m.
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| getVariantAnnotation | R Documentation |
getVariantAnnotation
Description
A convienice method to fetch variant annotation for specific variant/s
Usage
getVariantAnnotation(object, id, param = NULL)
Arguments
object |
an object of class CellBaseR |
id |
a charcter vector of length < 200 of genomic variants, eg 19:45411941:T:C |
param |
an object of class CellBaseParam |
Value
a dataframe of the query result
Examples
cb <- CellBaseR()
res <- getVariantAnnotation(cb, "19:45411941:T:C")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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