plot_quantile_diagnostic: Diagnostic QQ function

In merrillrudd/StreamUtils: Additional utilities for FishStats spatio-temporal modeling toolbox focusing on stream networks

Description

Diagnostic QQ function

Usage

plot_quantile_diagnostic(TmbData, Report, DateFile = paste0(getwd(),
  "/"), savedir = paste0(DateFile, "/QQ_Fn/"),
  FileName_PP = "Posterior_Predictive",
  FileName_Phist = "Posterior_Predictive-Histogram",
  FileName_QQ = "Q-Q_plot", FileName_Qhist = "Q-Q_hist", plot = 1:4,
  category_names = NULL)

Arguments

TmbData	TMB Model input data list
Report	TMB Model output data list
savedir	Directory to save plots, if NULL is specified then do not save plot
FileName_PP	If NULL is specified then do not save this type of plot
FileName_Phist	If NULL is specified then do not save this type of plot
FileName_QQ	If NULL is specified then do not save this type of plot
FileName_Qhist	If NULL is specified then do not save this type of plot
plot	default 1:4 to plot all diagnostics
category_names	names of categories for plotting labels

Value

A list containing results for each specified categories

Examples

Q <- QQ_Fn(TmbData = TmbData, Report = Report)

merrillrudd/StreamUtils documentation built on May 29, 2019, 9:31 a.m.