diffLogoTable: Draw DiffLogo-table
In mgledi/DiffLogo: DiffLogo: A comparative visualisation of biooligomer motifs

Description Usage Arguments Value Author(s) Examples

Draws a table of DiffLogos.

1 2	diffLogoTable(PWMs, sampleSizes = NULL, alphabet = DNA, configuration = list(), ...)

`PWMs`	a list/vector of position weight matrices (PWMs) each of type pwm, data.frame, or matrix
`sampleSizes`	the number of sequences behind each PWM
`alphabet`	the alphabet of the given PWMs
`configuration`	list of (probably part of) of configuration options. See diffLogoTableConfiguration.
`...`	set of parameters passed to the function 'axis' for plotting

none (draws table of difference logos)

Martin Nettling

motif_folder= "extdata/pwm"
motif_names = c("HepG2","MCF7","HUVEC","ProgFib")
motifs = list()
for (name in motif_names) {
  fileName = paste(motif_folder,"/",name,".pwm",sep="")
  file = system.file(fileName, package = "DiffLogo")
  motifs[[name]] = getPwmFromPwmFile(file)
}

diffLogoTable(motifs)