Fishpond contains methods for differential transcript and gene expression analysis of RNA-seq data using inferential replicates for uncertainty of abundance quantification, as generated by Gibbs sampling or bootstrap sampling. Also the package contains utilities for working with Salmon and Alevin quantification files.
|Bioconductor views||AlternativeSplicing BatchEffect DifferentialExpression DifferentialSplicing GeneExpression MultipleComparison Normalization RNASeq Regression Sequencing SingleCell Transcription Visualization|
|Maintainer||Michael Love <firstname.lastname@example.org>|
|Package repository||View on GitHub|
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