getAAindex: Extract amino acid attributes
In missuse/ragp: Mining for Hydroxyproline rich glycoprotein sequences
Description
Usage
Arguments
Value
Note
See Also
Description
This function extracts amino acid attributes
Usage
1
getAAindex(x, AA)
Arguments
x
A vector of k-mers (character vector)
AA
a matrix of amino acid attributes with attributes as rownames and amino acids as column names
Value
A matrix with specified amino acid attributes (dim: nchar(x) * ncol(AA)
Note
This is an internal function used inside predict_hyp
See Also
missuse/ragp documentation built on Jan. 4, 2022, 10:49 a.m.
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Description Usage Arguments Value Note See Also
Description
This function extracts amino acid attributes
Usage
1 | getAAindex(x, AA)
|
Arguments
x |
A vector of k-mers (character vector) |
AA |
a matrix of amino acid attributes with attributes as rownames and amino acids as column names |
Value
A matrix with specified amino acid attributes (dim: nchar(x) * ncol(AA)
Note
This is an internal function used inside predict_hyp
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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