Files in missuse/ragp
Mining for Hydroxyproline rich glycoprotein sequences
.Rbuildignore
.github/.gitignore
.github/workflows/check-standard.yaml
.github/workflows/pkgdown.yaml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/data.R
R/get_big_pi.R
R/get_cdd.R
R/get_espritz.R
R/get_hmm.R
R/get_netGPI.R
R/get_phobius.R
R/get_pred_gpi.R
R/get_signalp.R
R/get_signalp5.R
R/get_targetp.R
R/get_tmhmm.R
R/internal_hyp.R
R/maab.R
R/pfam2go.R
R/plot_prot.R
R/predict_hyp.R
R/scan_ag.R
R/scan_nglc.R
R/split_fasta.R
R/sysdata.rda
R/zzz.R
README.md
_pkgdown.yml
data/at_nsp.rda
docs/404.html
docs/LICENSE-text.html
docs/articles/PSV_p1.svg
docs/articles/PSV_p10.svg
docs/articles/PSV_p11.svg
docs/articles/PSV_p12.svg
docs/articles/PSV_p13.svg
docs/articles/PSV_p2.svg
docs/articles/PSV_p3.svg
docs/articles/PSV_p4.svg
docs/articles/PSV_p5.svg
docs/articles/PSV_p6.svg
docs/articles/PSV_p7.svg
docs/articles/PSV_p8.svg
docs/articles/PSV_p9.svg
docs/articles/hmmscan3.svg
docs/articles/hmmscan4.svg
docs/articles/index.html
docs/articles/pkgdown/PSV.html
docs/articles/pkgdown/PSV_files/header-attrs-2.11/header-attrs.js
docs/articles/pkgdown/PSV_files/header-attrs-2.6/header-attrs.js
docs/articles/pkgdown/PSV_files/header-attrs-2.8/header-attrs.js
docs/articles/pkgdown/analyse.html
docs/articles/pkgdown/analyse_files/header-attrs-2.11/header-attrs.js
docs/articles/pkgdown/analyse_files/header-attrs-2.6/header-attrs.js
docs/articles/pkgdown/analyse_files/header-attrs-2.8/header-attrs.js
docs/articles/pkgdown/filter.html
docs/articles/pkgdown/filter_files/header-attrs-2.11/header-attrs.js
docs/articles/pkgdown/filter_files/header-attrs-2.6/header-attrs.js
docs/articles/pkgdown/filter_files/header-attrs-2.8/header-attrs.js
docs/articles/pkgdown/start.html
docs/articles/pkgdown/start_files/header-attrs-2.11/header-attrs.js
docs/articles/pkgdown/start_files/header-attrs-2.6/header-attrs.js
docs/articles/pkgdown/start_files/header-attrs-2.8/header-attrs.js
docs/articles/ragp-vignette.html
docs/articles/ragp_flow_chart.svg
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/CTDC.html
docs/reference/QSOlevel.html
docs/reference/at_nsp.html
docs/reference/extractMBdesc.html
docs/reference/figures/README-plot_prot-2.svg
docs/reference/figures/ragp_flow_chart.svg
docs/reference/getAAindex.html
docs/reference/getKmer.html
docs/reference/get_big_pi.html
docs/reference/get_cdd.html
docs/reference/get_espritz.html
docs/reference/get_hmm.html
docs/reference/get_netGPI.html
docs/reference/get_phobius.html
docs/reference/get_pred_gpi.html
docs/reference/get_signalp.html
docs/reference/get_signalp5.html
docs/reference/get_targetp.html
docs/reference/get_tmhmm.html
docs/reference/index.html
docs/reference/maab.html
docs/reference/pfam2go.html
docs/reference/plot_prot-1.png
docs/reference/plot_prot-2.png
docs/reference/plot_prot.html
docs/reference/predict_hyp.html
docs/reference/scan_ag.html
docs/reference/scan_nglc.html
docs/reference/split_fasta.html
docs/reference/sub_hyp.html
inst/CITATION
inst/extdata/model15_v2.model
inst/extdata/model21_v2.model
inst/extdata/model_kmer13.model
inst/extdata/model_kmer21.model
man/CTDC.Rd
man/QSOlevel.Rd
man/at_nsp.Rd
man/extractMBdesc.Rd
man/figures/README-plot_prot-2.svg
man/getAAindex.Rd
man/getKmer.Rd
man/get_big_pi.Rd
man/get_cdd.Rd
man/get_espritz.Rd
man/get_hmm.Rd
man/get_netGPI.Rd
man/get_phobius.Rd
man/get_pred_gpi.Rd
man/get_signalp.Rd
man/get_signalp5.Rd
man/get_targetp.Rd
man/get_tmhmm.Rd
man/maab.Rd
man/pfam2go.Rd
man/plot_prot.Rd
man/predict_hyp.Rd
man/scan_ag.Rd
man/scan_nglc.Rd
man/split_fasta.Rd
man/sub_hyp.Rd
vignettes/bibtex.bib
vignettes/ragp-vignette.Rmd
vignettes/ragp_flow_chart.svg
vignettes/vig_files.rds
