listMS2scans: listMS2scans

In mjhelf/Mosaic: Metaboseek platform

listMS2scans

Description

Searches for MS2 scans with a given parent m/z and directly converts the resulting table into a single string

Usage

listMS2scans(mz, rt, ppm, rtw, MSData, rtMatch = F)

Arguments

mz	expected target (parent) m/z
rt	expected target (parent) retention time in seconds
ppm	target (parent) m/z tolerance in ppm
rtw	target (parent) rt tolerance in seconds
MSData	list of xcmsRaw objects
rtMatch	assign MS2 scans only to the matching feature with the closest rt

Details

Also, see Parentsearch

Value

a character vector

mjhelf/Mosaic documentation built on April 28, 2022, 11:32 a.m.