Man pages for mjhelf/Mosaic
Metaboseek platform

activeFTactiveFT
addLinesaddLines
analyzeFTanalyzeFT
analyzeTableanalyzeTable
asInclusionlistasInclusionlist
assignColorassignColor
bestgaussbestgauss
buildMseekFTbuildMseekFT
calcMZscalcMZs
cameraWrappercameraWrapper
ChangeFTGroupingModuleChangeFTGroupingModule
checkFolderscheckFolders
colorRampLegendcolorRampLegend
ColumnSelModuleColumnSelModule
constructFeatureTableconstructFeatureTable
constructRawLayoutconstructRawLayout
dashboardHeaderMdashboardHeaderM
densplotdensplot
densPlotWidgetdensplotWidget
dot-withHistory.withHistory
EICgeneralEICgeneral
EICmoduleEICmodule
EICOptionsModuleEICOptionsModule
EICplotEICplot
EICtitlesEICtitles
exIntensitiesexIntensities
fastPeakShapesfastPeakShapes
featureCalcsfeatureCalcs
featureReportfeatureReport
FeatureReportModuleFeatureReportModule
FeatureTableFeatureTable
FeatureTableContainerFeatureTableContainer
featureTableNormalizefeatureTableNormalize
filenamemakerMake filenames for exported .csv or .pdf files
FilePathModuleFilePathModule
FilterContainerFilterContainer
FilterModuleFilterModule
FindMS2ScansModuleFindMS2ScansModule
findMSnScansfindMSnScans
FindPatternsModuleFindPatternModule
find_peaks2find_peaks2
findsubgraphfindsubgraph
foldChangefoldChange
FTAnalysisParamConstructor for FTAnalysisParam class
FTAnalysisParam-classParameter class for Feature Table analysis
FTProcessHistoryConstructor for FTProcessHistory class
FTProcessHistory-classParameter class for Feature Table analysis
FTselectionFTselection
FunParamFunParam
FunParam-classParameter class for Feature Table analysis
getAllScansgetAllScans
get_common_dirGet common root folder of file paths
getFiltersgetFilters
getgaussgetgauss
GetIntensitiesModuleGetIntensitiesModule
getpeaks2getpeaks2
getScanInfogetScanInfo
getSiriusgetSirius
getSiriusTreegetSiriusTree
GetSiriusWidgetGetSiriusWidget
getSpectragetSpectra
GlobalOptionsModuleGlobalOptionsModule
GroupedEICModuleGroupedEICModule
groupedplotPlot summary data on grouped data
groupPlotgroupPlot
layout_components_qgraphlayout_components_qgraph
legendplotlegendplot
listMS2scanslistMS2scans
ListToReactiveValuesListToReactiveValues
LoadDataModuleLoadDataModule
LoadMSDataModuleLoadMSDataModule
loadMseekSessionloadMseekSession
LoadNetworkModuleLoadNetworkModule
loadRawMloadRawM
LoadSessionModuleLoadSessionModule
LoadTableModuleLoadTableModule
mActionButtonmActionButton
MainPageContainerMainPageContainer
MainPlotContainerMainPlotContainer
MainTableModuleMainTableModule
makeColorschememakeColorscheme
makeRTlist2makeRTlist2
makeScanlist2makeScanlist2
massquerymassquery
MassShiftsModuleMassShiftsModule
matchedToCharactermatchedToCharacter
MatchReferenceModuleMatchReferenceModule
mDownloadButtonmDownloadButton
mergeMSoldmergeMSold
mergepeaks2mergepeaks2
ModalWidgetModalWidget
MosClusterMosCluster
MS2BrowserModuleMS2BrowserModule
MseekAnovaMseekAnova
Mseek.colorsMseek.colors
MseekContainerMseekContainer
MseekContainersMseekContainers
MseekExamplePreloadMseekExamplePreload
MseekFamilyMseekFamily
MseekGraphsMseekGraphs
MseekHistoryWidgetMseekHistoryWidget
MseekMinimalServerMseekMinimalServer
MseekMinimalUIMseekMinimalUI
MseekModulesMseekModules
MseekOptionsMseekOptions
MseekWidgetsMseekWidgets
multiEICmultiEIC
MultiEICmoduleMultiEICmodule
multiEICplusmultiEICplus
MultiFilterModuleMultiFilterModule
MultiSpecModuleMultiSpecmodule
multittestmultittest
MZcalcModuleMZcalcModule
mzMatchmzMatch
MzqueryModuleMzqueryModule
NetworkModuleNetworkModule
OptionsContainerOptionsContainer
ParentsearchParentsearch
parsePatternsparsePatterns
parseTitleparseTitle
PcaViewModulePcaViewModule
peakDetectpeakDetect
peakFitterpeakFitter
peakFunctionpeakFunction
PeakPickModulePeakPickModule
PeptideAnnotationModulePeptideAnnotationModule
PeptideCalcModulePeptideCalcModule
PeptideModificationsModulePeptideModificationsModule
PeptideSequencePlotWidgetPeptideSequencePlotWidget
PlotBrowserModulePlotBrowserModule
plotlyTextFormatterplotlyTextFormatter
PlotModulePlotModule
plotpeaksplotpeaks
plotSMILEplotSMILE
plotTreeplotTree
PlotWindowPlotWindow
quickMergeMSquickMergeMS
QuickPlotsModuleQuickPlotsModule
rawEICmrawEICm
rawGroupingrawGrouping
reactiveValuesToListRecreactiveValuesToListRec
reconstructValuesreconstructValues
RegroupMSDataModuleRegroupMSDataModule
reverselog_transreverselog_trans
rtadjustrtadjust
RtCorrViewModuleRtCorrViewModule
rtexportrtexport
RTplotRTplot
runMseekRunMseek
runSiriusrunSirius
safelogsafelog
saveMseekSessionsaveMseekSession
SaveNetworkModuleSaveNetworkModule
saveScanlistsaveScanlist
SaveSessionModuleSaveSessionModule
savetablesavetable
SaveTableModuleSaveTableModule
SelectActiveTableModuleSelectActiveTableModule
SelectMS2ModuleSelectMS2Module
SelectMSGroupingModuleSelectMSGroupingModule
SelectProjectFolderModuleSelectProjectFolderModule
ShowSiriusModuleShowSiriusModule
simpleTableModulesimpleTableModule
simplifyGraphsimplifyGraph
SimplifyNetworkModuleSimplifyNetworkModule
SiriusModuleSiriusModule
SiriusOptionsModuleSiriusOptionsModule
SpecmoduleSpecmodule
SpecModule2SpecModule2
specplotspecplot
specplot2specplot2
SpecplotWidgetSpecplotWidget
subsetEICssubsetEICs
SwitchButtonSwitchButton
TableAnalysisModuleTableAnalysisModule
tableGroupingtableGrouping
TableModuleTableModule
TableModule2TableModule
TableUpdateChunkTableUpdateChunk
tableWritertableWriter
updateDFupdateDF
updateFeatureTableupdateFeatureTable
updateFTupdateFT
updateFTgroupingupdateFTgrouping
updateFTIndexupdateFTgrouping
updateRawLayoutupdateRawLayout
updaterModuleupdaterModule
UploadTableModuleUploadTableModule
valuesvalues
VennDiagramModuleVennDiagramModule
VennWidgetModuleVennWidgetModule
WelcomePageModuleWelcomePageModule
writeMSwriteMS
writeStatuswriteStatus
xcmsWidgetxcmsWidget
mjhelf/Mosaic documentation built on Sept. 23, 2019, 5:45 a.m.