API for montilab/K2Taxonomer
Creating annotated submodules of high-throughput data through recursive partitioning
| Global functions | |
|---|---|
| .checkK2 | Source code |
| .dgeWrapper | Source code |
| .doSplit | Source code |
| .fixFDR | Source code |
| .formatCov | Source code |
| .isK2 | Source code |
| .runFisher1sided | Source code |
| .runFisher2sided | Source code |
| .runTtest | Source code |
| .runWilcox | Source code |
| .signatureWrapper | Source code |
| K2-class | Man page |
| K2dashboard | Man page Source code |
| K2data | Man page |
| K2data,K2-method | Man page |
| K2data<- | Man page |
| K2data<-,K2-method | Man page |
| K2dendro | Man page Source code |
| K2eSet | Man page |
| K2eSet,K2-method | Man page |
| K2eSet<- | Man page |
| K2eSet<-,K2-method | Man page |
| K2gSet | Man page |
| K2gSet,K2-method | Man page |
| K2gSet<- | Man page |
| K2gSet<-,K2-method | Man page |
| K2gene2Pathway | Man page |
| K2gene2Pathway,K2-method | Man page |
| K2gene2Pathway<- | Man page |
| K2gene2Pathway<-,K2-method | Man page |
| K2geneURL | Man page |
| K2geneURL,K2-method | Man page |
| K2geneURL<- | Man page |
| K2geneURL<-,K2-method | Man page |
| K2genesetURL | Man page |
| K2genesetURL,K2-method | Man page |
| K2genesetURL<- | Man page |
| K2genesetURL<-,K2-method | Man page |
| K2genesets | Man page |
| K2genesets,K2-method | Man page |
| K2genesets<- | Man page |
| K2genesets<-,K2-method | Man page |
| K2info | Man page |
| K2info,K2-method | Man page |
| K2info<- | Man page |
| K2info<-,K2-method | Man page |
| K2meta | Man page |
| K2meta,K2-method | Man page |
| K2meta<- | Man page |
| K2meta<-,K2-method | Man page |
| K2preproc | Man page Source code |
| K2res | Man page |
| K2results | Man page |
| K2results,K2-method | Man page |
| K2results<- | Man page |
| K2results<-,K2-method | Man page |
| K2tax | Man page Source code |
| K2visNetwork | Man page Source code |
| aggregateGSVAscores | Man page Source code |
| cKmeansWrapper | Man page Source code |
| cKmeansWrapperSubsample | Man page Source code |
| getDGETable | Man page Source code |
| getEnrichmentTable | Man page Source code |
| getGenePathways | Man page Source code |
| getTestsModTable | Man page Source code |
| hclustWrapper | Man page Source code |
| runDGEmods | Man page Source code |
| runDSSEmods | Man page Source code |
| runGSEmods | Man page Source code |
| runGSVAmods | Man page Source code |
| runK2Taxonomer | Man page Source code |
| runTestsMods | Man page Source code |
