percentage.calc: Emprical p-values for query cells

In morris-lab/Capybara: A tool to measure cell identity and fate transitions

Emprical p-values for query cells

Description

This function returns a list of emprical p-value matrices. Every matrix in the list contains emprical p-values of all possilbe celltypes for a single query cells under test.times resampled backgrounds.

Usage

percentage.calc(mtx, bkgd.mtx)

Arguments

mtx	The matrix of identity scores of query cells. The row number is the total number of query cells and the column number is the number of total number of possible cell types
bkgd.mtx	The matrix of identity score of reference cells. The row number is the total number of reference cells and the column number is the number of total number of possible cell types

morris-lab/Capybara documentation built on June 13, 2022, 10:33 p.m.