ref.construction: Reference Construction

In morris-lab/Capybara: A tool to measure cell identity and fate transitions

Reference Construction

Description

This function constructs reference from single-cell resolution reference data to be used for quadratic programming calculation

Usage

ref.construction(sc, sc.aux, criteria)

Arguments

sc	The single-cell resolution dataset
sc.aux	The auxiliary data frame that annotate the single-cell resolutiond dataset
criteria	The column name to use for construction of the reference

Examples

ref.construction(single.ref.mtx, single.aux.df, "cell.type")

morris-lab/Capybara documentation built on June 13, 2022, 10:33 p.m.