transition.score: Transition Score Calculation
In morris-lab/Capybara: A tool to measure cell identity and fate transitions
View source: R/TransitionScoreCalculation.R
transition.score R Documentation
Transition Score Calculation
Description
This function calculates the transition scores for each cell state that is connected by cells with multiple identities.
Usage
transition.score(multi.id.meta)
Arguments
multi.id.meta
A data frame that contains cells with multiple identities. Column 1 - cell barcode, Column 2 - cell type call, Column 3 - counts, Column 4 - corresponding QP scores.
Value
A data frame that contains the calculated transition scores for each identity
Examples
transition.score(multi.id.meta)
morris-lab/Capybara documentation built on June 13, 2022, 10:33 p.m.
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View source: R/TransitionScoreCalculation.R
| transition.score | R Documentation |
Transition Score Calculation
Description
This function calculates the transition scores for each cell state that is connected by cells with multiple identities.
Usage
transition.score(multi.id.meta)
Arguments
multi.id.meta |
A data frame that contains cells with multiple identities. Column 1 - cell barcode, Column 2 - cell type call, Column 3 - counts, Column 4 - corresponding QP scores. |
Value
A data frame that contains the calculated transition scores for each identity
Examples
transition.score(multi.id.meta)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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