eQTLsRegStat_GUI: eQTLs of CREs statistics

In mortyran/NetLCP: Prioritizing combinations of regulatory elements in the heterogeneous network with variant ‘switches’ detection

eQTLs of CREs statistics

Description

eQTLs of CREs statistics

Usage

eQTLsRegStat_GUI(regData, eQTLsData, regulationType, topCREs, filterDegree, selectCREs)

Arguments

regData	the standard output of the function binaryRegulationExtract or multieleRegulation.
eQTLsData	the standard out of the function eQTLsDetection.
regulationType	a character representing the CREs type, it should be one of "circRNA-miRNA", "lncRNA-miRNA", "lncRNA-mRNA", "miRNA-mRNA", "miRNA-pathway", "mRNA-pathway", "circRNA-miRNA-mRNA", "lncRNA-miRNA-mRNA", "miRNA-mRNA-pathway", "lncRNA-miRNA-mRNA-pathway", "circRNA-miRNA-mRNA-pathway".
topCREs	an integer representing the number of the top prioritized CREs to exhibit.
filterDegree	an integer for filtering the nodes.
selectCREs	a vector of elements or CREs.

Value

eQTLs on CREs statistics with barplot.

Examples

 eQTLsRegStat_GUI(regData = NULL, eQTLsData = NULL, regulationType = "miRNA-mRNA", topCREs = 10, filterDegree = 40, selectCREs = NULL)

mortyran/NetLCP documentation built on Feb. 26, 2023, 11:33 a.m.