regVarDetection: Variant 'switches' in CREs Detection

In mortyran/NetLCP: Prioritizing combinations of regulatory elements in the heterogeneous network with variant ‘switches’ detection

Variant 'switches' in CREs Detection

Description

Detect the Variant 'switches' in CREs.

Usage

regVarDetection(regVar, regulationType)

Arguments

regData	the dataframe of output from binaryRegulation and multieleRegulation functions, accepting miRNA-mRNA, miRNA-mRNA-pathway, lncRNA-miRNA-mRNA, circRNA-miRNA-mRNA, lncRNA-miRNA-mRNA-pathway, circRNA-miRNA-mRNA-pathway.
regulationType	a character representing the CREs type, it should be "miRNA-mRNA", "miRNA-mRNA-pathway", "lncRNA-miRNA-mRNA", "circRNA-miRNA-mRNA", "lncRNA-miRNA-mRNA-pathway" or "circRNA-miRNA-mRNA-pathway".

Value

Variant 'switches' Detection.

Examples

regVarDetection(regVar = NULL, regulationType = "lncRNA-miRNA-mRNA")

mortyran/NetLCP documentation built on Feb. 26, 2023, 11:33 a.m.