API for mrajeev08/treerabid
Reconstruct Rabies Transmission Trees
| Global functions | |
|---|---|
| add_uncertainty | Man page |
| assign_progen | Man page |
| boot_trees | Man page |
| build_all_links | Man page Source code |
| build_consensus_links | Man page |
| build_consensus_tree | Man page |
| build_known_tree | Man page |
| build_tree | Man page Source code |
| check_lineages | Man page |
| check_loops | Man page |
| dist_gamma1 | Man page Source code |
| dist_gamma2 | Man page Source code |
| dist_gamma_mixed | Man page Source code |
| dist_lnorm1 | Man page Source code |
| dist_lnorm2 | Man page Source code |
| dist_lnorm_mixed | Man page Source code |
| dist_weibull1 | Man page Source code |
| dist_weibull2 | Man page Source code |
| dist_weibull_mixed | Man page Source code |
| find_lineages | Man page |
| find_lins_to_fix | Man page |
| find_loops_to_fix | Man page |
| fit_sims_pi | Man page Source code |
| get_chain_membership | Man page Source code |
| get_chain_persistence | Man page Source code |
| get_chain_stats | Man page Source code |
| get_edge_dt | Man page |
| get_gr | Man page |
| get_graph | Man page Source code |
| get_kappa | Source code |
| get_membership | Man page |
| list_funs | Man page |
| select_progenitor | Man page |
| si_fun_lnorm | Man page Source code |
| si_gamma1 | Man page Source code |
| si_gamma2 | Man page Source code |
| si_lnorm1 | Man page Source code |
| si_lnorm2 | Man page Source code |
| si_weibull1 | Man page Source code |
| si_weibull2 | Man page Source code |
| sim_generations | Man page Source code |
| sim_times_pi | Man page Source code |
