si_gamma1: Gamma distribution for probabilities and cutoff for serial...
In mrajeev08/treerabid: Reconstruct Rabies Transmission Trees
si_gamma1 R Documentation
Gamma distribution for probabilities and cutoff for serial interval
Description
These are examples for how to write the si_fun and dist_fun functions.
They must take three parameters: ttree, params, and cutoff.
Usage
si_gamma1(ttree, params, cutoff = NULL)
Details
If the cutoff is NULL, it will take the ttree and add a new column
with the probability (using the column t_diff which is generated inside
build_tree). If the cutoff is not NULL then it will return the value at which
you should prune the trees–this should either return a single value of length 1
or a vector of values of length nrow(ttree). See dist_gamma_mixed for an example.
mrajeev08/treerabid documentation built on Oct. 15, 2024, 12:14 p.m.
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| si_gamma1 | R Documentation |
Gamma distribution for probabilities and cutoff for serial interval
Description
These are examples for how to write the si_fun and dist_fun functions. They must take three parameters: ttree, params, and cutoff.
Usage
si_gamma1(ttree, params, cutoff = NULL)
Details
If the cutoff is NULL, it will take the ttree and add a new column with the probability (using the column t_diff which is generated inside build_tree). If the cutoff is not NULL then it will return the value at which you should prune the trees–this should either return a single value of length 1 or a vector of values of length nrow(ttree). See dist_gamma_mixed for an example.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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