API for mrc-ide/PlasmoMAPI
Mapping Plasmodium Spatial Connectivity from Genetic Data
| Global functions | |
|---|---|
| %>% | Man page |
| .onUnload | Source code |
| PlasmoMAPI | Man page |
| assert_2d | Source code |
| assert_atomic | Source code |
| assert_bounded | Source code |
| assert_custom_class | Source code |
| assert_dataframe | Source code |
| assert_decreasing | Source code |
| assert_dim | Source code |
| assert_eq | Source code |
| assert_file_exists | Source code |
| assert_gr | Source code |
| assert_greq | Source code |
| assert_in | Source code |
| assert_increasing | Source code |
| assert_int | Source code |
| assert_le | Source code |
| assert_length | Source code |
| assert_leq | Source code |
| assert_limit | Source code |
| assert_list | Source code |
| assert_logical | Source code |
| assert_matrix | Source code |
| assert_matrix_numeric | Source code |
| assert_ncol | Source code |
| assert_neq | Source code |
| assert_noduplicates | Source code |
| assert_non_null | Source code |
| assert_not_in | Source code |
| assert_nrow | Source code |
| assert_null | Source code |
| assert_numeric | Source code |
| assert_pos | Source code |
| assert_pos_int | Source code |
| assert_same_length | Source code |
| assert_same_length_multiple | Source code |
| assert_single | Source code |
| assert_single_bounded | Source code |
| assert_single_int | Source code |
| assert_single_logical | Source code |
| assert_single_numeric | Source code |
| assert_single_pos | Source code |
| assert_single_pos_int | Source code |
| assert_single_string | Source code |
| assert_square_matrix | Source code |
| assert_string | Source code |
| assert_symmetric_matrix | Source code |
| assert_vector | Source code |
| assert_vector_bounded | Source code |
| assert_vector_int | Source code |
| assert_vector_numeric | Source code |
| assert_vector_pos | Source code |
| assert_vector_pos_int | Source code |
| assign_map | Man page Source code |
| assign_map_cpp | Source code |
| check_PlasmoMAPI_loaded | Man page Source code |
| col_hotcold | Man page Source code |
| create_map | Man page Source code |
| daily_cols | Source code |
| define_default | Source code |
| force_vector | Source code |
| get_barrier_intersect | Man page Source code |
| get_ellipse | Man page Source code |
| get_merged_poly | Source code |
| get_significant_hexes | Man page Source code |
| get_spatial_distance | Man page Source code |
| is.pm_project | Man page Source code |
| is.pm_sim | Man page Source code |
| load_coords | Man page Source code |
| load_data | Man page Source code |
| log_sum | Source code |
| lonlat_to_bearing | Man page Source code |
| matrix_to_rcpp | Source code |
| midpoints | Source code |
| nice_format | Source code |
| overlay_points | Man page Source code |
| plot.pm_project | Source code |
| plot.pm_sim | Source code |
| plot_coverage | Man page Source code |
| plot_daily_states | Man page Source code |
| plot_dist | Man page Source code |
| plot_ellipses | Man page Source code |
| plot_leaflet | Man page Source code |
| plot_map | Man page Source code |
| plot_network | Man page Source code |
| pm_analysis | Man page Source code |
| pm_analysis_cpp | Source code |
| pm_file | Man page Source code |
| pm_proj.check_coords_loaded | Source code |
| pm_proj.check_data_loaded | Source code |
| pm_proj.check_map_assigned | Source code |
| pm_proj.check_map_loaded | Source code |
| pm_proj.check_output_exists | Source code |
| pm_project | Man page Source code |
| print.pm_project | Source code |
| print.pm_sim | Source code |
| print_full | Man page Source code |
| quantile_95 | Source code |
| rcpp_to_array | Source code |
| rcpp_to_matrix | Source code |
| sim_falciparum | Man page Source code |
| sim_falciparum_cpp | Source code |
| summary.pm_project | Source code |
| summary.pm_sim | Source code |
| update_progress | Source code |
| user_yes_no | Source code |
