R/PlasmoMAPI.R

In mrc-ide/PlasmoMAPI: Mapping Plasmodium Spatial Connectivity from Genetic Data

#------------------------------------------------
#' @title PlasmoMAPI
#'
#' @description Genetic data from Plasmodium parasites can tell us something
#'   about the spatial connectivity of parasite populations. Infections that
#'   trace back to a common ancestor in the recent past tend to be highly
#'   related, meaning we can use estimates of pairwise relatedness between
#'   sampling locations to infer levels of gene flow in the population, and to
#'   identify barriers and corridors of migration. PlasmoMAPI does this in a
#'   statistically robust way, accounting for the natural fall-off of
#'   relatedness with distance to identify significant discontinuities in the
#'   overall spatial pattern.
#'
#' @name PlasmoMAPI
#' @docType package
NULL

#------------------------------------------------
#' @useDynLib PlasmoMAPI, .registration = TRUE
#' @importFrom Rcpp sourceCpp
NULL

#------------------------------------------------
# unload DLL when package is unloaded
#' @noRd
.onUnload <- function(libpath) {
  library.dynam.unload("PlasmoMAPI", libpath)  # nocov
}