spim_simulate_process_output: Process simulation output

In mrc-ide/spimalot: Support for 'sircovid'

Process simulation output

Description

Process simulation output

Usage

spim_simulate_process_output(
  obj,
  combined_region,
  regions,
  incidence_states,
  reset_states = FALSE,
  rm.rtUK = FALSE,
  output_region = NULL,
  simulation_start_date = NULL
)

Arguments

obj	A simulated object
combined_region	The name of the aggregated region (e.g. 'england)
regions	Character vector of regions to use
incidence_states	Character vector of states to calculate incidence
reset_states	Logical, indicating if incidence states should be reset to zero at the start of the simulation
rm.rtUK	Logical, indicating if the aggregated UK trajectory should be removed
output_region	Character vector of regions to output, defaults to combined_region
simulation_start_date	If not NULL then removes all data before the given date.

mrc-ide/spimalot documentation built on Oct. 15, 2024, 12:15 p.m.