karyotype: karyotype
In mskilab/gGnome: gGnome: reference based assembly graph for analyzing rearranged genomes
karyotype R Documentation
karyotype
Description
returns gWalk (if karyo arg is not NULL) or gGraph of
cytoBands given chrom.sizes file, with built in colormap
for disjoining with other gGraphs and visualizing cytobands
in the context of a gGRaph
Usage
karyotype(karyo = NULL, cytoband = NULL, ...)
Arguments
karyo
karyotype string to generate a gWalk of alleles representing karyotype
cytoband
path or URL to UCSC style cytoband file
...
Additional arguments sent to the gTrack constructor
Author(s)
Marcin Imielinski
mskilab/gGnome documentation built on May 8, 2024, 4:25 p.m.
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| karyotype | R Documentation |
karyotype
Description
returns gWalk (if karyo arg is not NULL) or gGraph of cytoBands given chrom.sizes file, with built in colormap for disjoining with other gGraphs and visualizing cytobands in the context of a gGRaph
Usage
karyotype(karyo = NULL, cytoband = NULL, ...)
Arguments
karyo |
karyotype string to generate a gWalk of alleles representing karyotype |
cytoband |
path or URL to UCSC style cytoband file |
... |
Additional arguments sent to the |
Author(s)
Marcin Imielinski
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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