grl.end: Get the right ends of a 'GRangesList'

In mskilab/gUtils: R Package Providing Additional Capabilities and Speed for GenomicRanges Operations

Get the right ends of a GRangesList

Description

Function wrapping around gr.end to work on GRangesLists

Usage

grl.end(grl, width = 1, force = FALSE, ignore.strand = TRUE, clip = TRUE)

Arguments

width	integer Specify subranges of greater width including the start of the range. (default = 1)
force	boolean Allows returned GRangesList to have ranges outside of its Seqinfo bounds. (default = FALSE)
ignore.strand	boolean If set to FALSE, will extend '-' strands from the other direction. (default = TRUE)
clip	boolean Trims returned GRangesList so that it does not extend beyond bounds of the input (default = TRUE)
x	GRangesList object containing GRanges to operate on

Value

GRangesList object of width = width ranges representing end of each genomic range in the input.

Author(s)

Kevin Hadi

mskilab/gUtils documentation built on June 6, 2023, 12:08 a.m.