grl.string: Create string representation of 'GRangesList'

Description Usage Arguments Value Author(s) Examples

View source: R/gUtils.R

Description

Return UCSC style interval string corresponding to each GRanges in the GRangesList. One line per per GRangesList item. GRanges elements themselves are separated by sep

Usage

1
grl.string(grl, mb = FALSE, sep = ",", ...)

Arguments

grl

GRangesList to convert to string vector

mb

boolean Flag to return as MB and round to "round" (default = FALSE)

sep

Character to separate single GRanges ranges (default = ',')

...

Additional arguments to be passed to gr.string

Value

Character vector where each element is a GRanges pile corresponding to a single GRangesList element

Author(s)

Marcin Imielinski

Examples

1

mskilab/gUtils documentation built on Sept. 1, 2018, 8:21 p.m.