maf_to_simple: maf_to_simple
In mskilab/skitools: Various mskilab R utilties
maf_to_simple R Documentation
maf_to_simple
Description
Dumps maf files to "simple" format for input into oncotator, adds dummy ref_allele and tum_allele1 cols if not provided
Usage
maf_to_simple(maf, filename, genome)
Arguments
maf
maf data.frame
filename
output file
genome
An BSgenome object (was "build genome build (='hg19')")
Author(s)
Marcin Imielinski
mskilab/skitools documentation built on Aug. 31, 2023, 1:13 p.m.
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| maf_to_simple | R Documentation |
maf_to_simple
Description
Dumps maf files to "simple" format for input into oncotator, adds dummy ref_allele and tum_allele1 cols if not provided
Usage
maf_to_simple(maf, filename, genome)
Arguments
maf |
maf data.frame |
filename |
output file |
genome |
An BSgenome object (was "build genome build (='hg19')") |
Author(s)
Marcin Imielinski
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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