parsesnpeff: parsesnpeff
In mskilab/skitools: Various mskilab R utilties
parsesnpeff R Documentation
parsesnpeff
Description
parses vcf file containing SnpEff annotations on Strelka calls
Usage
parsesnpeff(vcf, id = NULL)
Arguments
vcf
path to vcf
id
id of case
Value
GRanges object of all variants and annotations
Author(s)
Kevin Hadi
mskilab/skitools documentation built on March 5, 2025, 11:52 p.m.
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| parsesnpeff | R Documentation |
parsesnpeff
Description
parses vcf file containing SnpEff annotations on Strelka calls
Usage
parsesnpeff(vcf, id = NULL)
Arguments
vcf |
path to vcf |
id |
id of case |
Value
GRanges object of all variants and annotations
Author(s)
Kevin Hadi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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