plot_multiplicity: plot_multiplicity
In mskilab/skitools: Various mskilab R utilties
plot_multiplicity R Documentation
plot_multiplicity
Description
Plots allele fractions and colors in an individual based on multiplicity call stratified by total copy number value
"individual" is a list or data frame with field $Individual_Id, $Purity
maf is a maf file annotated with multiplicity (ie the output of allele_multiplicity) with additional fields
$cn.tot, $mult, $mult.p
Usage
plot_multiplicity(individual, maf, plot.reads = F)
Author(s)
Marcin Imielinski
mskilab/skitools documentation built on Aug. 31, 2023, 1:13 p.m.
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| plot_multiplicity | R Documentation |
plot_multiplicity
Description
Plots allele fractions and colors in an individual based on multiplicity call stratified by total copy number value "individual" is a list or data frame with field $Individual_Id, $Purity
maf is a maf file annotated with multiplicity (ie the output of allele_multiplicity) with additional fields $cn.tot, $mult, $mult.p
Usage
plot_multiplicity(individual, maf, plot.reads = F)
Author(s)
Marcin Imielinski
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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