ssegment: wrapper around DNAcopy to segment a coverage profile

ssegmentR Documentation

wrapper around DNAcopy to segment a coverage profile

Description

Internal function utilizing DNAcopy to segment a coverage profile

Usage

ssegment(cov, field = NULL, log = TRUE, verbose = TRUE, alpha = 1e-05)

Arguments

tcov

GRanges of binned genome-wide coverage

Value

GRanges of genomewise segments of piecewise constant coverage

Author(s)

Marcin Imielinski


mskilab/skitools documentation built on June 15, 2025, 2:54 p.m.