system.call: Wrapper to base 'system' function to call system (e.g. perl)...

system.callR Documentation

Wrapper to base system function to call system (e.g. perl) from R. The only benefit to this wrapper is a more controlled verbose argument.

Description

Wrapper to base system function to call system (e.g. perl) from R. The only benefit to this wrapper is a more controlled verbose argument.

Usage

system.call(syscall, verbose = T)

Arguments

syscall

string containing the system call

verbose

print the syscall to screen, and it's stdout

Author(s)

Jeremiah Wala jwala@broadinstitute.org

Examples

# system.call('perl s/[0-9]+//g file1 > file2')

mskilab/skitools documentation built on Aug. 31, 2023, 1:13 p.m.