DifferentialConnectome: DifferentialConnectome

In msraredon/Connectome: Single Cell Connectomics

DifferentialConnectome

Description

Currently in beta testing. Creates a fold-change connectome from two input connectomes, generally unfiltered. Must be node-aligned, from the same reference mapping, and unfiltered. ('edge' columns must contain identical entries, though not necessarily in the same order.)

Usage

DifferentialConnectome(connect.ref, connect.test, min.pct = NULL)

Arguments

connect.ref	A connectome from a system
connect.test	A connectome from a different system, to be compared to connect.ref
min.pct	Default NULL. Threshold to return clusterwise observations for both ligand and receptor. Only needs to be satisfied in connect.ref OR in connect.test.

msraredon/Connectome documentation built on April 11, 2022, 9:16 a.m.