otropos2: Run Atropos for nifti objects

View source: R/otropos.R

otropos2R Documentation

Run Atropos for nifti objects

Description

Runs otropos but has different argument names to be more consistent with extrantsr

Usage

otropos2(img, mask = NULL, smoothing_factor = 0.2, radius = c(1, 1, 1), ...)

Arguments

img

Images to segment.

mask

Mask of Image

smoothing_factor

amount of smoothing in Markov random Field. Increasing this number causes more smoothing whereas decreasing the number lessens the smoothing.

radius

the mrf neighborhood. Length must equal the number of dimensions of img

...

arguments to pass to otropos

See Also

otropos, atropos


muschellij2/extrantsr documentation built on June 3, 2024, 7:04 p.m.