otropos2: Run Atropos for nifti objects

Description Usage Arguments See Also

View source: R/otropos.R

Description

Runs otropos but has different argument names to be more consistent with extrantsr

Usage

1
otropos2(img, mask = NULL, smoothing_factor = 0.2, radius = c(1, 1, 1), ...)

Arguments

img

Images to segment.

mask

Mask of Image

smoothing_factor

amount of smoothing in Markov random Field. Increasing this number causes more smoothing whereas decreasing the number lessens the smoothing.

radius

the mrf neighborhood. Length must equal the number of dimensions of img

...

arguments to pass to otropos

See Also

otropos, atropos


muschellij2/extrantsr documentation built on July 27, 2021, 7:41 a.m.