fsl_resample | R Documentation |
Resample an Image to Specific Voxel Size
fsl_resample( file, voxel_size, outfile = NULL, retimg = TRUE, reorient = FALSE, opts = NULL, verbose = TRUE )
file |
Input file to resample |
voxel_size |
Voxel size (in mm). This should be a scalar number. |
outfile |
(character) output filename |
retimg |
(logical) return image of class nifti |
reorient |
(logical) If retimg, should file be reoriented when read in?
Passed to |
opts |
options to pass to |
verbose |
(logical) print out command before running |
If retimg
then object of class nifti. Otherwise,
the output file.
if (have_fsl()) { file = mni_fname(mm = 1, brain = TRUE) est2 = fsl_resample(file = file, voxel_size = 1, retimg = FALSE) pixdim(est2) est = fsl_resample(file = file, voxel_size = 1) pixdim(est) }
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