fslsplit: Split images using FSL

In muschellij2/fslr: Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')

Split images using FSL

Description

This function calls fslsplit to merge files on some dimension and either saves the image or returns an object of class nifti

Usage

fslsplit(
  infile,
  direction = c("t", "x", "y", "z"),
  output_basename = NULL,
  retimg = TRUE,
  reorient = FALSE,
  verbose = TRUE
)

fsl_split(..., retimg = FALSE)

Arguments

infile	(character) input filename
direction	(character) direction to split over: t (time), x, y, z
output_basename	(character) prefix to have for output
retimg	(logical) return image of class nifti
reorient	(logical) If retimg, should file be reoriented when read in? Passed to readnii.
verbose	(logical) print out command before running
...	not used

Value

List of output files

Note

Functions with underscores have different defaults and will return an output filename, so to be used for piping

muschellij2/fslr documentation built on May 10, 2024, 2:12 a.m.