readrpi | R Documentation |
This function calls the readnii
function after
calling rpi_orient_file
to force RPI orientation.
readrpi(file, ..., verbose = TRUE)
file |
file name of the NIfTI file. |
... |
Arguments to pass to |
verbose |
print diagnostics, passed to |
if (have.fsl()){ print(fsl_version()) in_ci <- function() { nzchar(Sys.getenv("CI")) } if (in_ci()) { destfile = tempfile(fileext = ".nii.gz") url = paste0("https://ndownloader.figshare.com/", "files/18068546") old_url = paste0("https://github.com/muschellij2/", "Neurohacking/files/3454385/113-01-MPRAGE2.nii.gz") dl = tryCatch(download.file(url, destfile = destfile)) if (inherits(dl, "try-error") || dl != 0) { dl = download.file(old_url, destfile = destfile) } res = readrpi(destfile) } }
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