read_ng_dump: Read neuroglancer data dump from disk / web

In natverse/fafbseg: Support Functions for Analysis of FAFB EM Segmentation

Read neuroglancer data dump from disk / web

Description

Read neuroglancer data dump from disk / web

Usage

read_ng_dump(x, ...)

Arguments

x	Path to directory, zip file, or set of data files
...	Additional argument passed to read_ng_raw

Details

A neuroglancer data dump consists of a mix of JSON and custom binary data files, which together define mesh data for (fragments) of neurons together with associated metadata. See fetch_all_curl for how to prepare such a data dump.

Value

A list of class ng_raw_list with additional metadata as attributes.

See Also

fetch_all_curl, read_ng_raw

Examples

## Not run: 
fetch_all_curl("all_curl.sh", outdir="alldata",
  regex="brainmaps.googleapis.com", fixed=TRUE)
meshdata=read_ng_dump("alldata")
m=as.mesh3d(meshdata)
shade3d(m, col='red')

# can also be a (remote) zip file
meshdata=read_ng_dump("https://myfiles.com/myneuron.zip")

## End(Not run)

natverse/fafbseg documentation built on Nov. 11, 2024, 9:50 p.m.